EnhancerDB
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  3. rs138554355[chr5:90580688]
Enhancers that have rs138554355[chr5:90580688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90560003 90595415 enh22426
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs138554355[chr5:90580688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90580668 90580689 IRF1 JASPAR yes 64187358
chr5 90580683 90580696 DUXA JASPAR yes 64187359
chr5 90580683 90580701 MAFF JASPAR yes 64187360
chr5 90580684 90580695 DUX4 JASPAR yes 64187361
chr5 90580684 90580699 MAFK JASPAR yes 64187362
Genes associated with rs138554355[chr5:90580688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More