EnhancerDB
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  3. rs138657180[chr17:77898686]
Enhancers that have rs138657180[chr17:77898686]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs138657180[chr17:77898686]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77898350 77900343 TCF7L2 GTRD no Colon (HCT116) 21796705
chr17 77898587 77900114 TCF7L2 GTRD no Colon (HCT116) 21796706
chr17 77898661 77898986 ZNF143 GTRD no Epithelial (MCF-7) 21796707
chr17 77898668 77898688 PPARG JASPAR yes 56229603
chr17 77898670 77898688 ESR2 JASPAR yes 56229605
chr17 77898676 77898686 SP1 JASPAR yes 56229606
chr17 77898686 77898692 GATA1 TRANSFAC yes 56229608
chr17 77898686 77898694 GATA5 JASPAR yes 56229609
Genes associated with rs138657180[chr17:77898686], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More