EnhancerDB
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  3. rs138680979[chr1:39030905]
Enhancers that have rs138680979[chr1:39030905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39019405 39033055 enh47164
Brain (SK-N-MC) Blood (T-cell) Esophagus Thyroid Neural Stem Cells (H9) Thymus
Transcript factors that have rs138680979[chr1:39030905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39030896 39030906 NFIA JASPAR yes 28229436
chr1 39030896 39030914 NFYA JASPAR yes 28229437
chr1 39030899 39030909 EN2 JASPAR yes 28229439
chr1 39030899 39030909 ESX1 JASPAR yes 28229440
chr1 39030899 39030909 GBX1 JASPAR yes 28229441
chr1 39030899 39030909 GBX2 JASPAR yes 28229442
chr1 39030899 39030909 GSX2 JASPAR yes 28229443
chr1 39030899 39030909 HESX1 JASPAR yes 28229444
chr1 39030899 39030909 LBX2 JASPAR yes 28229445
chr1 39030899 39030909 LHX2 JASPAR yes 28229446
chr1 39030899 39030909 MIXL1 JASPAR yes 28229447
chr1 39030899 39030909 RAX JASPAR yes 28229448
chr1 39030900 39030908 BARX1 JASPAR yes 28229452
chr1 39030900 39030908 BSX JASPAR yes 28229453
chr1 39030900 39030908 EN1 JASPAR yes 28229454
chr1 39030900 39030908 ISX JASPAR yes 28229455
chr1 39030900 39030908 LHX9 JASPAR yes 28229456
chr1 39030900 39030908 MSX1 JASPAR yes 28229457
chr1 39030900 39030908 MSX2 JASPAR yes 28229458
chr1 39030900 39030908 PRRX1 JASPAR yes 28229459
chr1 39030900 39030908 RAX2 JASPAR yes 28229460
chr1 39030900 39030908 SHOX JASPAR yes 28229461
Genes associated with rs138680979[chr1:39030905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More