EnhancerDB
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  3. rs138859996[chr1:41164246]
Enhancers that have rs138859996[chr1:41164246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs138859996[chr1:41164246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41164233 41164248 SCRT1 JASPAR yes 28335868
chr1 41164237 41164246 SNAI2 JASPAR yes 28335869
chr1 41164237 41164247 ID4 JASPAR yes 28335870
chr1 41164237 41164247 TCF3 JASPAR yes 28335871
chr1 41164237 41164247 TCF4 JASPAR yes 28335872
chr1 41164239 41164248 ZEB1 JASPAR yes 28335873
Genes associated with rs138859996[chr1:41164246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More