EnhancerDB
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  3. rs139007650[chr1:115968996]
Enhancers that have rs139007650[chr1:115968996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 115966905 115976995 enh27090
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Heart
chr1 115968975 115969167 vista3033
VISTA
Transcript factors that have rs139007650[chr1:115968996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 115968769 115969285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331017
chr1 115968769 115969285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823612
chr1 115968799 115969123 ZNF143 GTRD no Epithelial (MCF-7) 21331018
chr1 115968799 115969123 ZNF143 GTRD no Epithelial (MCF-7) 107823613
chr1 115968898 115969294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331019
chr1 115968898 115969294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823614
chr1 115968925 115969475 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331020
chr1 115968925 115969475 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823615
chr1 115968951 115969215 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21331021
chr1 115968951 115969215 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107823616
chr1 115968992 115969003 FOXH1 JASPAR yes 31734986
chr1 115968992 115969003 FOXH1 JASPAR yes 118355489
chr1 115968993 115968999 ZNF354C JASPAR yes 31734987
chr1 115968993 115968999 ZNF354C JASPAR yes 118355490
chr1 115968996 115969001 NFY TRANSFAC yes 31734988
chr1 115968996 115969001 NFY TRANSFAC yes 118355491
chr1 115968996 115969008 TEAD1 JASPAR yes 31734989
chr1 115968996 115969008 TEAD1 JASPAR yes 118355492
Genes associated with rs139007650[chr1:115968996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More