EnhancerDB
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  3. rs139072565[chr1:25354117]
Enhancers that have rs139072565[chr1:25354117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs139072565[chr1:25354117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25354112 25354124 TFAP2C JASPAR yes 27555376
chr1 25354112 25354127 TFAP2A JASPAR yes 27555377
chr1 25354114 25354123 TFAP2A JASPAR yes 27555378
Genes associated with rs139072565[chr1:25354117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More