EnhancerDB
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  3. rs139086066[chr1:42270414]
Enhancers that have rs139086066[chr1:42270414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
Transcript factors that have rs139086066[chr1:42270414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42270410 42270420 GSX2 JASPAR yes 28424504
chr1 42270411 42270419 BARX1 JASPAR yes 28424505
Genes associated with rs139086066[chr1:42270414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More