EnhancerDB
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  3. rs139273982[chr18:57593493]
Enhancers that have rs139273982[chr18:57593493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57569615 57596800 enh4881
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs139273982[chr18:57593493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57593341 57593747 ZNF274 GTRD no Bone Marrow (K562) 21825347
chr18 57593348 57593756 TCF7L2 GTRD no Colon (HCT116) 21825348
chr18 57593363 57593880 TCF7L2 GTRD no Colon (HCT116) 21825349
chr18 57593368 57593558 ZNF274 GTRD no Bone Marrow (K562) 21825350
chr18 57593400 57593828 ZNF274 GTRD no Bone Marrow (K562) 21825351
chr18 57593493 57593510 ESR1 JASPAR yes 111065710
chr18 57593493 57593511 ESR1 JASPAR yes 111065711
chr18 57593493 57593511 ESR2 JASPAR yes 111065712
Genes associated with rs139273982[chr18:57593493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More