EnhancerDB
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  3. rs139318838[chr1:43478370]
Enhancers that have rs139318838[chr1:43478370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139318838[chr1:43478370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43478363 43478378 FOXP1 JASPAR yes 28478115
chr1 43478364 43478375 FOXA1 JASPAR yes 28478116
chr1 43478364 43478375 FOXH1 JASPAR yes 28478117
chr1 43478365 43478377 FOXC2 JASPAR yes 28478118
chr1 43478366 43478377 FOXP2 JASPAR yes 28478119
chr1 43478368 43478376 FOXG1 JASPAR yes 28478120
chr1 43478370 43478376 HiNF-A TRANSFAC yes 28478121
Genes associated with rs139318838[chr1:43478370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More