EnhancerDB
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  3. rs139322466[chr1:200310753]
Enhancers that have rs139322466[chr1:200310753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs139322466[chr1:200310753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200309825 200310868 ZNF143 GTRD no Epithelial (MCF-7) 21363143
chr1 200310286 200310882 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21363144
chr1 200310352 200310856 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363145
chr1 200310413 200310789 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21363146
chr1 200310745 200310760 FOXP1 JASPAR yes 34436912
chr1 200310745 200310766 IRF1 JASPAR yes 34436913
chr1 200310746 200310756 NFATC3 JASPAR yes 34436914
chr1 200310748 200310755 NFATC2 JASPAR yes 34436915
chr1 200310749 200310763 STAT1 JASPAR yes 34436916
chr1 200310749 200310764 STAT2 JASPAR yes 34436917
chr1 200310750 200310765 FOXP1 JASPAR yes 34436918
Genes associated with rs139322466[chr1:200310753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More