EnhancerDB
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  3. rs139328301[chr1:42420039]
Enhancers that have rs139328301[chr1:42420039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs139328301[chr1:42420039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42420022 42420040 MAFF JASPAR yes 28441537
chr1 42420024 42420039 MAFK JASPAR yes 28441539
chr1 42420029 42420039 EVX1 JASPAR yes 28441540
chr1 42420029 42420039 EVX2 JASPAR yes 28441541
chr1 42420029 42420039 LHX6 JASPAR yes 28441542
Genes associated with rs139328301[chr1:42420039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More