EnhancerDB
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  3. rs139369825[chr1:172712407]
Enhancers that have rs139369825[chr1:172712407]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs139369825[chr1:172712407]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172712402 172712412 TFE3 JASPAR yes 33150467
chr1 172712404 172712409 MYC TRANSFAC yes 33150468
chr1 172712404 172712409 USF1 TRANSFAC yes 33150469
chr1 172712404 172712409 USF2 TRANSFAC yes 33150470
chr1 172712404 172712411 USF1 JASPAR yes 33150471
Genes associated with rs139369825[chr1:172712407], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More