EnhancerDB
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  3. rs139371887[chr1:42155111]
Enhancers that have rs139371887[chr1:42155111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139371887[chr1:42155111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42155095 42155112 BCL6B JASPAR yes 28410558
chr1 42155103 42155114 SPDEF JASPAR yes 28410559
chr1 42155103 42155123 RREB1 JASPAR yes 28410560
chr1 42155111 42155116 SP1 TRANSFAC yes 28410561
Genes associated with rs139371887[chr1:42155111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More