EnhancerDB
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  3. rs139399189[chr1:242375992]
Enhancers that have rs139399189[chr1:242375992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 242367225 242377155 enh67362
Breast Prostate (PC-3) Neural Stem Cells (H9)
Transcript factors that have rs139399189[chr1:242375992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 242375670 242376046 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887706
chr1 242375767 242376017 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887707
chr1 242375777 242376047 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107887708
chr1 242375986 242375997 E2F1 JASPAR yes 36642406
chr1 242375990 242375995 SP1 TRANSFAC yes 36642407
chr1 242375991 242376003 TFAP2A JASPAR yes 36642408
chr1 242375991 242376003 TFAP2B JASPAR yes 36642409
chr1 242375991 242376003 TFAP2C JASPAR yes 36642410
chr1 242375991 242376006 TFAP2A JASPAR yes 36642411
chr1 242375991 242376006 TFAP2C JASPAR yes 36642412
chr1 242375992 242376001 TFAP2A JASPAR yes 36642413
chr1 242375992 242376003 EBF1 JASPAR yes 36642414
Genes associated with rs139399189[chr1:242375992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More