EnhancerDB
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  3. rs139427260[chr17:77784494]
Enhancers that have rs139427260[chr17:77784494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77780565 77806815 enh4626
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Stomach Muscle (A673) Placenta Blood (Karpas-422) Pancreas Pancreas (Panc1) Thymus Heart
Transcript factors that have rs139427260[chr17:77784494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77782632 77784686 POLR2A UCSC Txn Factor no Conserved 108305249
chr17 77783718 77784537 ZNF143 GTRD no Epithelial (MCF-7) 21795851
chr17 77783718 77784537 ZNF143 GTRD no Epithelial (MCF-7) 108305254
chr17 77783726 77784628 TCF7L2 GTRD no Colon (HCT116) 108305256
chr17 77783768 77784542 TCF7L2 GTRD no Colon (HCT116) 108305259
chr17 77783777 77784605 TCF7L2 GTRD no Colon (HCT116) 108305260
chr17 77783807 77784555 ZNF274 GTRD no Blood (GM12878) 108305262
chr17 77783835 77784650 ZNF274 GTRD no Blood (GM12878) 108305268
chr17 77783846 77784745 ZNF143 GTRD no Epithelial (MCF-7) 21795860
chr17 77783846 77784745 ZNF143 GTRD no Epithelial (MCF-7) 108305270
chr17 77783906 77784724 ZNF143 GTRD no Epithelial (MCF-7) 21795867
chr17 77783906 77784724 ZNF143 GTRD no Epithelial (MCF-7) 108305281
chr17 77783922 77784629 ZNF143 GTRD no Epithelial (MCF-7) 21795873
chr17 77783922 77784629 ZNF143 GTRD no Epithelial (MCF-7) 108305288
chr17 77783933 77784664 ZNF143 GTRD no Epithelial (MCF-7) 21795878
chr17 77783933 77784664 ZNF143 GTRD no Epithelial (MCF-7) 108305294
chr17 77783934 77784989 ZNF143 GTRD no Epithelial (MCF-7) 21795879
chr17 77783934 77784989 ZNF143 GTRD no Epithelial (MCF-7) 108305295
chr17 77783934 77784989 ZNF143 GTRD no Epithelial (MCF-7) 108305296
chr17 77783939 77784722 ZNF143 GTRD no Epithelial (MCF-7) 21795880
chr17 77783939 77784722 ZNF143 GTRD no Epithelial (MCF-7) 108305297
chr17 77783942 77784894 ZNF274 GTRD no Blood (GM12878) 108305299
chr17 77783942 77784894 ZNF274 GTRD no Blood (GM12878) 108305300
chr17 77783971 77784505 ZBTB33 GTRD no Lung (A549) 108305303
chr17 77784007 77784612 ZNF143 GTRD no Epithelial (MCF-7) 21795885
chr17 77784007 77784612 ZNF143 GTRD no Epithelial (MCF-7) 108305308
chr17 77784034 77784513 ZNF143 GTRD no Epithelial (MCF-7) 21795886
chr17 77784034 77784513 ZNF143 GTRD no Epithelial (MCF-7) 108305311
chr17 77784104 77784520 ZNF274 GTRD no Blood (GM12878) 108305317
chr17 77784166 77784538 ZNF143 GTRD no Epithelial (MCF-7) 21795891
chr17 77784166 77784538 ZNF143 GTRD no Epithelial (MCF-7) 108305319
chr17 77784168 77784528 ZNF274 GTRD no Liver (HepG2) 21795892
chr17 77784168 77784528 ZNF274 GTRD no Liver (HepG2) 108305320
chr17 77784271 77784641 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21795894
chr17 77784300 77784684 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21795895
chr17 77784333 77784649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21795896
chr17 77784349 77784659 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21795897
chr17 77784477 77784497 RREB1 JASPAR yes 56219972
chr17 77784485 77784505 RREB1 JASPAR yes 56219973
chr17 77784487 77784507 RREB1 JASPAR yes 56219974
chr17 77784493 77784513 RREB1 JASPAR yes 56219975
Genes associated with rs139427260[chr17:77784494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More