EnhancerDB
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  3. rs139548398[chr1:117037731]
Enhancers that have rs139548398[chr1:117037731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139548398[chr1:117037731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117037395 117037775 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333097
chr1 117037525 117037785 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333098
chr1 117037628 117038256 ZBTB33 GTRD no Brain (SK-N-SH) 21333099
chr1 117037718 117038182 ZBTB33 GTRD no Brain (SK-N-SH) 21333100
chr1 117037721 117037738 BCL6B JASPAR yes 31813694
chr1 117037723 117037738 RFX5 JASPAR yes 31813695
chr1 117037731 117037734 MYB TRANSFAC yes 31813696
Genes associated with rs139548398[chr1:117037731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More