EnhancerDB
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  3. rs139549625[chr1:42355450]
Enhancers that have rs139549625[chr1:42355450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs139549625[chr1:42355450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42355441 42355457 RFX2 JASPAR yes 28434136
chr1 42355441 42355457 RFX3 JASPAR yes 28434137
chr1 42355441 42355457 RFX4 JASPAR yes 28434138
chr1 42355441 42355457 RFX5 JASPAR yes 28434139
chr1 42355442 42355461 RFX2 JASPAR yes 28434140
Genes associated with rs139549625[chr1:42355450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More