EnhancerDB
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  3. rs139569206[chr1:40482020]
Enhancers that have rs139569206[chr1:40482020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40476445 40483374 enh11772
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell)
Transcript factors that have rs139569206[chr1:40482020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40482001 40482022 IRF1 JASPAR yes 28309436
chr1 40482001 40482022 ZNF263 JASPAR yes 28309437
chr1 40482003 40482024 IRF1 JASPAR yes 28309438
chr1 40482005 40482026 IRF1 JASPAR yes 28309439
chr1 40482009 40482030 IRF1 JASPAR yes 28309440
chr1 40482011 40482026 PRDM1 JASPAR yes 28309441
chr1 40482011 40482026 STAT2 JASPAR yes 28309442
chr1 40482012 40482026 SPIC JASPAR yes 28309443
chr1 40482012 40482026 STAT1 JASPAR yes 28309444
chr1 40482013 40482034 IRF1 JASPAR yes 28309445
chr1 40482014 40482029 FOXP1 JASPAR yes 28309446
chr1 40482016 40482031 FOXP1 JASPAR yes 28309447
chr1 40482019 40482034 MEF2C JASPAR yes 28309448
Genes associated with rs139569206[chr1:40482020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More