EnhancerDB
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  3. rs139673205[chr1:52415796]
Enhancers that have rs139673205[chr1:52415796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52410065 52425504 enh361
Brain (SK-N-MC) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9)
Transcript factors that have rs139673205[chr1:52415796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52415785 52415803 NFYA JASPAR yes 28876955
chr1 52415789 52415799 HOXB13 JASPAR yes 28876957
chr1 52415789 52415799 HOXD13 JASPAR yes 28876958
chr1 52415790 52415800 ALX3 JASPAR yes 28876959
chr1 52415790 52415800 ESX1 JASPAR yes 28876960
chr1 52415790 52415800 GBX2 JASPAR yes 28876961
chr1 52415790 52415800 GSX1 JASPAR yes 28876962
chr1 52415790 52415800 GSX2 JASPAR yes 28876963
chr1 52415790 52415800 HESX1 JASPAR yes 28876964
chr1 52415790 52415800 HOXB3 JASPAR yes 28876965
chr1 52415790 52415800 LBX2 JASPAR yes 28876966
chr1 52415790 52415800 LHX2 JASPAR yes 28876967
chr1 52415790 52415800 MIXL1 JASPAR yes 28876968
chr1 52415790 52415800 MNX1 JASPAR yes 28876969
chr1 52415790 52415800 RAX JASPAR yes 28876970
chr1 52415791 52415799 BARX1 JASPAR yes 28876971
chr1 52415791 52415799 BSX JASPAR yes 28876972
chr1 52415791 52415799 DLX6 JASPAR yes 28876973
chr1 52415791 52415799 ISX JASPAR yes 28876974
chr1 52415791 52415799 LBX1 JASPAR yes 28876975
chr1 52415791 52415799 LHX9 JASPAR yes 28876976
chr1 52415791 52415799 MSX1 JASPAR yes 28876977
chr1 52415791 52415799 MSX2 JASPAR yes 28876978
chr1 52415791 52415799 NKX6-2 JASPAR yes 28876979
chr1 52415791 52415799 PRRX1 JASPAR yes 28876980
chr1 52415791 52415799 RAX2 JASPAR yes 28876981
chr1 52415791 52415799 SHOX JASPAR yes 28876982
chr1 52415791 52415799 UNCX JASPAR yes 28876983
chr1 52415791 52415800 VENTX JASPAR yes 28876984
chr1 52415792 52415802 PAX3 JASPAR yes 28876985
chr1 52415792 52415802 PAX7 JASPAR yes 28876986
Genes associated with rs139673205[chr1:52415796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More