EnhancerDB
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  3. rs139675429[chr5:172191346]
Enhancers that have rs139675429[chr5:172191346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs139675429[chr5:172191346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191333 172191350 RARA JASPAR yes 67824008
chr5 172191333 172191350 RXRA JASPAR yes 67824009
chr5 172191340 172191350 RORA JASPAR yes 67824011
chr5 172191341 172191352 ESRRA JASPAR yes 67824012
chr5 172191341 172191352 ESRRB JASPAR yes 67824013
chr5 172191341 172191354 NR2F1 JASPAR yes 67824014
chr5 172191343 172191351 NR4A2 JASPAR yes 67824015
chr5 172191345 172191349 ESR1 TRANSFAC yes 67824016
Genes associated with rs139675429[chr5:172191346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More