EnhancerDB
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  3. rs139679548[chr1:108079736]
Enhancers that have rs139679548[chr1:108079736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 108065165 108083215 enh12108
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Breast Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs139679548[chr1:108079736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 108079561 108080033 GATA3 GTRD no Thymus 21326334
chr1 108079657 108080157 ZNF143 GTRD no Epithelial (MCF-7) 21326335
chr1 108079708 108080128 ZNF143 GTRD no Epithelial (MCF-7) 21326336
chr1 108079725 108079736 TBX20 JASPAR yes 31346773
chr1 108079725 108079736 TBX2 JASPAR yes 31346774
chr1 108079725 108079738 EOMES JASPAR yes 31346775
chr1 108079726 108079736 TBR1 JASPAR yes 31346781
Genes associated with rs139679548[chr1:108079736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More