EnhancerDB
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  3. rs139716855[chr18:55501143]
Enhancers that have rs139716855[chr18:55501143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55498005 55517815 enh17733
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs139716855[chr18:55501143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55500803 55501493 TEF1 GTRD no Bone (Osteoblast) 21823571
chr18 55500877 55501241 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823573
chr18 55500910 55501500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823574
chr18 55500961 55501357 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823575
chr18 55500994 55501334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823576
chr18 55501008 55501292 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823577
chr18 55501028 55501197 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823578
chr18 55501028 55501272 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823579
chr18 55501028 55501348 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823580
chr18 55501033 55501303 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823581
chr18 55501035 55501265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823582
chr18 55501044 55501255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823583
chr18 55501050 55501360 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823584
chr18 55501062 55501392 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823585
chr18 55501071 55501180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21823586
chr18 55501079 55501315 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823587
chr18 55501086 55501350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823588
chr18 55501094 55501398 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823589
chr18 55501106 55501476 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823590
chr18 55501140 55501151 SPDEF JASPAR yes 110890505
chr18 55501141 55501401 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21823591
Genes associated with rs139716855[chr18:55501143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More