EnhancerDB
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  3. rs139748462[chr1:42248263]
Enhancers that have rs139748462[chr1:42248263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139748462[chr1:42248263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42248253 42248274 REST JASPAR yes 28422016
chr1 42248254 42248273 REST JASPAR yes 28422017
chr1 42248258 42248268 SP1 JASPAR yes 28422018
Genes associated with rs139748462[chr1:42248263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More