EnhancerDB
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  3. rs139779125[chr12:54608957]
Enhancers that have rs139779125[chr12:54608957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs139779125[chr12:54608957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54608363 54609023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550291
chr12 54608427 54609077 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550293
chr12 54608507 54608963 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550308
chr12 54608507 54608983 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21550309
chr12 54608529 54609153 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21550316
chr12 54608556 54608976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21550329
chr12 54608956 54608966 ZNF740 JASPAR yes 121029099
chr12 54608956 54608970 GLIS2 JASPAR yes 121029100
chr12 54608957 54608967 SP1 JASPAR yes 121029101
Genes associated with rs139779125[chr12:54608957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More