EnhancerDB
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  3. rs139821730[chr1:17224038]
Enhancers that have rs139821730[chr1:17224038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs139821730[chr1:17224038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17224027 17224042 FOXP1 JASPAR yes 27062858
chr1 17224028 17224043 FOXP1 JASPAR yes 27062859
chr1 17224029 17224044 FOXP1 JASPAR yes 27062860
chr1 17224029 17224050 IRF1 JASPAR yes 27062861
chr1 17224030 17224045 FOXP1 JASPAR yes 27062862
chr1 17224030 17224051 IRF1 JASPAR yes 27062863
chr1 17224031 17224046 FOXP1 JASPAR yes 27062864
chr1 17224031 17224052 IRF1 JASPAR yes 27062865
chr1 17224032 17224047 FOXP1 JASPAR yes 27062866
chr1 17224033 17224048 FOXP1 JASPAR yes 27062867
chr1 17224033 17224054 IRF1 JASPAR yes 27062868
chr1 17224034 17224049 FOXP1 JASPAR yes 27062869
chr1 17224034 17224055 IRF1 JASPAR yes 27062870
chr1 17224035 17224050 FOXP1 JASPAR yes 27062871
Genes associated with rs139821730[chr1:17224038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More