EnhancerDB
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  3. rs139858390[chr1:153704795]
Enhancers that have rs139858390[chr1:153704795]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153697963 153709075 enh61908
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Thyroid Colon (HCT116) Lung (PC-9) Stomach
chr1 153704694 153704943 vista3351
VISTA
Transcript factors that have rs139858390[chr1:153704795]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153704626 153705003 EBF1 UCSC Txn Factor no Conserved 107832224
chr1 153704626 153705003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832225
chr1 153704629 153705149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832226
chr1 153704629 153705219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832227
chr1 153704642 153705162 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832228
chr1 153704668 153705024 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832229
chr1 153704689 153705073 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832230
chr1 153704701 153704981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832231
chr1 153704701 153705021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340157
chr1 153704701 153705021 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832232
chr1 153704730 153705064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832233
chr1 153704781 153704795 EBF1 JASPAR yes 32267375
chr1 153704781 153704795 EBF1 JASPAR yes 118371610
chr1 153704792 153704863 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107832234
Genes associated with rs139858390[chr1:153704795], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More