EnhancerDB
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  3. rs139887396[chr17:47100808]
Enhancers that have rs139887396[chr17:47100808]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47091445 47106595 enh17200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139887396[chr17:47100808]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47098654 47101009 ZNF274 GTRD no Bone Marrow (K562) 108268750
chr17 47098654 47101009 ZNF274 GTRD no Bone Marrow (K562) 108268751
chr17 47098964 47101075 ZNF274 GTRD no Bone Marrow (K562) 108268757
chr17 47099119 47100953 TCF7L2 GTRD no Colon (HCT116) 21768093
chr17 47099119 47100953 TCF7L2 GTRD no Colon (HCT116) 108268759
chr17 47099140 47100831 ZNF274 GTRD no Liver (HepG2) 21768094
chr17 47099140 47100831 ZNF274 GTRD no Liver (HepG2) 108268760
chr17 47099146 47101018 ZNF274 GTRD no Blood (GM12878) 108268761
chr17 47099285 47101074 ZBTB33 GTRD no Lung (A549) 108268769
chr17 47099345 47100864 ZNF274 GTRD no Liver (HepG2) 21768097
chr17 47099345 47100864 ZNF274 GTRD no Liver (HepG2) 108268770
chr17 47099369 47100872 ZNF274 GTRD no Blood (GM12878) 108268773
chr17 47099406 47100818 TCF7L2 GTRD no Colon (HCT116) 21768102
chr17 47099406 47100818 TCF7L2 GTRD no Colon (HCT116) 108268777
chr17 47099409 47100921 ZNF274 GTRD no Bone Marrow (K562) 108268778
chr17 47099429 47100912 TCF7L2 GTRD no Colon (HCT116) 21768103
chr17 47099429 47100912 TCF7L2 GTRD no Colon (HCT116) 108268780
chr17 47099449 47100868 TCF7L2 GTRD no Colon (HCT116) 21768105
chr17 47099449 47100868 TCF7L2 GTRD no Colon (HCT116) 108268783
chr17 47099568 47100868 TCF7L2 GTRD no Colon (HCT116) 21768109
chr17 47099568 47100868 TCF7L2 GTRD no Colon (HCT116) 108268789
chr17 47099775 47100885 ZBTB33 GTRD no Lung (A549) 108268811
chr17 47099777 47100893 ZNF143 GTRD no Epithelial (MCF-7) 21768124
chr17 47099777 47100893 ZNF143 GTRD no Epithelial (MCF-7) 108268812
chr17 47099809 47100817 ZBTB33 GTRD no Lung (A549) 108268822
chr17 47099868 47100969 ZNF274 GTRD no Liver (HepG2) 21768145
chr17 47099868 47100969 ZNF274 GTRD no Liver (HepG2) 108268843
chr17 47099919 47100984 ZNF274 GTRD no Blood (GM12878) 108268869
chr17 47099919 47101659 ZBTB33 GTRD no Lung (A549) 108268870
chr17 47099941 47100902 ZBTB33 GTRD no Lung (A549) 108268881
chr17 47099948 47100834 ZBTB33 GTRD no Lung (A549) 108268882
chr17 47099949 47101011 ZBTB33 GTRD no Lung (A549) 108268883
chr17 47099952 47100820 ZBTB33 GTRD no Brain (SK-N-SH) 108268886
chr17 47099967 47100978 ZBTB33 GTRD no Lung (A549) 108268897
chr17 47099968 47101031 ZBTB33 GTRD no Lung (A549) 108268898
chr17 47099971 47100918 ZNF143 GTRD no Epithelial (MCF-7) 21768165
chr17 47099971 47100918 ZNF143 GTRD no Epithelial (MCF-7) 108268899
chr17 47099978 47100936 ZNF143 GTRD no Epithelial (MCF-7) 21768167
chr17 47099978 47100936 ZNF143 GTRD no Epithelial (MCF-7) 108268902
chr17 47099988 47101132 ZBTB33 GTRD no Brain (SK-N-SH) 108268907
chr17 47100018 47100964 ZNF274 GTRD no Liver (HepG2) 21768172
chr17 47100018 47100964 ZNF274 GTRD no Liver (HepG2) 108268923
chr17 47100040 47100826 ZNF274 GTRD no Liver (HepG2) 21768175
chr17 47100040 47100826 ZNF274 GTRD no Liver (HepG2) 108268929
chr17 47100047 47100841 ZBTB33 GTRD no Brain (SK-N-SH) 108268932
chr17 47100051 47100944 ZNF274 GTRD no Liver (HepG2) 21768179
chr17 47100051 47100944 ZNF274 GTRD no Liver (HepG2) 108268937
chr17 47100068 47100823 ZNF274 GTRD no Liver (HepG2) 21768184
chr17 47100068 47100823 ZNF274 GTRD no Liver (HepG2) 108268943
chr17 47100791 47100809 NR3C1 JASPAR yes 54609995
chr17 47100794 47100809 AR JASPAR yes 54609996
chr17 47100802 47100819 RXRA JASPAR yes 54609997
Genes associated with rs139887396[chr17:47100808], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More