EnhancerDB
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  3. rs139889727[chr1:42416135]
Enhancers that have rs139889727[chr1:42416135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42414541 42425761 enh26655
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs139889727[chr1:42416135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42416122 42416135 HNF1B JASPAR yes 28440921
chr1 42416126 42416139 DUXA JASPAR yes 28440922
chr1 42416127 42416138 DUX4 JASPAR yes 28440923
Genes associated with rs139889727[chr1:42416135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More