EnhancerDB
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  3. rs139919115[chr5:172194340]
Enhancers that have rs139919115[chr5:172194340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs139919115[chr5:172194340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 107693851
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537470
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537471
chr5 172191953 172200023 POLR2A UCSC Txn Factor no Conserved 108537472
chr5 172194333 172194348 MEF2C JASPAR yes 67824444
chr5 172194334 172194349 MEF2A JASPAR yes 67824445
chr5 172194335 172194347 MEF2A JASPAR yes 67824446
chr5 172194335 172194347 MEF2B JASPAR yes 67824447
chr5 172194335 172194347 MEF2D JASPAR yes 67824448
Genes associated with rs139919115[chr5:172194340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More