EnhancerDB
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  3. rs139933534[chr17:2393480]
Enhancers that have rs139933534[chr17:2393480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2383605 2399907 enh32054
Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs139933534[chr17:2393480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2391628 2397454 TCF7L2 GTRD no Colon (HCT116) 21739610
chr17 2391628 2397454 TCF7L2 GTRD no Colon (HCT116) 108230832
chr17 2392133 2397458 ZNF143 GTRD no Epithelial (MCF-7) 21739611
chr17 2392133 2397458 ZNF143 GTRD no Epithelial (MCF-7) 108230833
chr17 2393476 2393483 SPI1 JASPAR yes 52755597
chr17 2393476 2393484 FEV JASPAR yes 52755598
chr17 2393478 2393483 ETS2 TRANSFAC yes 52755599
Genes associated with rs139933534[chr17:2393480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More