EnhancerDB
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  3. rs139945434[chr16:85415501]
Enhancers that have rs139945434[chr16:85415501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs139945434[chr16:85415501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85414820 85417934 ZNF143 GTRD no Epithelial (MCF-7) 21724463
chr16 85414820 85417934 ZNF143 GTRD no Epithelial (MCF-7) 108214124
chr16 85415026 85415940 TCF7L2 GTRD no Colon (HCT116) 108214125
chr16 85415071 85415867 TCF7L2 GTRD no Colon (HCT116) 108214126
chr16 85415128 85415852 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724466
chr16 85415128 85415852 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214127
chr16 85415228 85415732 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724467
chr16 85415228 85415732 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214128
chr16 85415231 85417189 ZNF274 GTRD no Cervix (HeLa-S3) 21724468
chr16 85415231 85417189 ZNF274 GTRD no Cervix (HeLa-S3) 108214129
chr16 85415241 85415765 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724469
chr16 85415241 85415765 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214130
chr16 85415248 85416062 POLR2A UCSC Txn Factor no Conserved 108214131
chr16 85415286 85416170 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724470
chr16 85415286 85416170 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214132
chr16 85415366 85415844 TCF7L2 GTRD no Colon (HCT116) 108214133
chr16 85415397 85415798 ZNF274 GTRD no Bone Marrow (K562) 21724471
chr16 85415397 85415798 ZNF274 GTRD no Bone Marrow (K562) 108214134
chr16 85415416 85415866 TCF7L2 GTRD no Colon (HCT116) 108214135
chr16 85415418 85415907 ZNF274 GTRD no Bone Marrow (K562) 21724472
chr16 85415418 85415907 ZNF274 GTRD no Bone Marrow (K562) 108214136
chr16 85415422 85416066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724473
chr16 85415422 85416066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214137
chr16 85415424 85415960 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724474
chr16 85415424 85415960 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214138
chr16 85415427 85417731 ZNF274 GTRD no Bone Marrow (K562) 21724475
chr16 85415427 85417731 ZNF274 GTRD no Bone Marrow (K562) 108214139
chr16 85415484 85417098 ZNF143 GTRD no Epithelial (MCF-7) 21724476
chr16 85415484 85417098 ZNF143 GTRD no Epithelial (MCF-7) 108214140
chr16 85415487 85416089 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724477
chr16 85415487 85416089 ZBTB7A UCSC Txn Factor no Conserved 108214141
chr16 85415487 85416089 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214142
chr16 85415495 85415939 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21724478
chr16 85415495 85415939 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108214143
chr16 85415496 85415511 TFAP2A JASPAR yes 12054729
chr16 85415498 85415513 TFAP2C JASPAR yes 12054730
chr16 85415499 85415511 TFAP2A JASPAR yes 12054731
chr16 85415499 85415511 TFAP2B JASPAR yes 12054732
chr16 85415499 85415511 TFAP2C JASPAR yes 12054733
chr16 85415500 85415509 TFAP2A JASPAR yes 12054734
Genes associated with rs139945434[chr16:85415501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More