EnhancerDB
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  3. rs139947195[chr1:201883504]
Enhancers that have rs139947195[chr1:201883504]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201879005 201889035 enh12530
Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Heart
chr1 201883288 201883655 vista4584
VISTA
Transcript factors that have rs139947195[chr1:201883504]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201879927 201884764 ZNF274 GTRD no Blood (GM12878) 107857150
chr1 201879954 201886120 ZBTB33 GTRD no Lung (A549) 107857151
chr1 201881372 201884972 ZNF274 GTRD no Bone Marrow (K562) 107857152
chr1 201881673 201889087 ZNF274 GTRD no Bone Marrow (K562) 107857153
chr1 201882315 201884582 ZNF274 GTRD no Bone Marrow (K562) 107857154
chr1 201882367 201884665 ZNF274 GTRD no Blood (GM12878) 107857157
chr1 201882375 201884839 ZNF274 GTRD no Blood (GM12878) 107857158
chr1 201882378 201884680 ZBTB33 GTRD no Lung (A549) 107857159
chr1 201882379 201884717 ZBTB33 GTRD no Lung (A549) 107857160
chr1 201882380 201884128 ZNF274 GTRD no Cervix (HeLa-S3) 21365298
chr1 201882380 201884128 ZNF274 GTRD no Cervix (HeLa-S3) 107857161
chr1 201882411 201883776 ZNF274 GTRD no Bone Marrow (K562) 107857163
chr1 201882414 201884163 ZNF274 GTRD no Blood (GM12878) 107857164
chr1 201882416 201884949 ZNF274 GTRD no Blood (GM12878) 107857165
chr1 201882417 201884468 ZNF274 GTRD no Bone Marrow (K562) 107857166
chr1 201882418 201884820 ZNF274 GTRD no Bone Marrow (K562) 107857167
chr1 201882423 201884025 ZNF274 GTRD no Blood (GM12878) 107857168
chr1 201882439 201884323 ZNF274 GTRD no Blood (GM12878) 107857175
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 21365301
chr1 201882451 201886182 ZNF274 GTRD no Cervix (HeLa-S3) 107857176
chr1 201882456 201884154 ZNF274 GTRD no Cervix (HeLa-S3) 21365302
chr1 201882456 201884154 ZNF274 GTRD no Cervix (HeLa-S3) 107857179
chr1 201882461 201884632 ZNF274 GTRD no Bone Marrow (K562) 107857180
chr1 201882498 201884216 ZNF274 GTRD no Blood (GM12878) 107857182
chr1 201882508 201884268 ZNF274 GTRD no Liver (HepG2) 107857183
chr1 201882540 201884214 ZNF274 GTRD no Bone Marrow (K562) 107857185
chr1 201882548 201883993 ZBTB33 GTRD no Lung (A549) 107857186
chr1 201882616 201883526 ZBTB33 GTRD no Lung (A549) 107857188
chr1 201882644 201884205 ZBTB33 GTRD no Brain (SK-N-SH) 21365303
chr1 201882644 201884205 ZBTB33 GTRD no Brain (SK-N-SH) 107857189
chr1 201883215 201884123 ZBTB33 GTRD no Brain (SK-N-SH) 21365305
chr1 201883215 201884123 ZBTB33 GTRD no Brain (SK-N-SH) 107857192
chr1 201883394 201884219 ZNF274 GTRD no Cervix (HeLa-S3) 21365306
chr1 201883394 201884219 ZNF274 GTRD no Cervix (HeLa-S3) 107857193
chr1 201883414 201884322 ZNF274 GTRD no Bone Marrow (K562) 107857194
chr1 201883426 201884224 TCF7L2 GTRD no Colon (HCT116) 107857195
chr1 201883429 201884551 TCF7L2 GTRD no Colon (HCT116) 107857196
chr1 201883455 201884113 ZNF274 GTRD no Bone Marrow (K562) 107857197
chr1 201883489 201883504 FOXA1 JASPAR yes 34537105
chr1 201883489 201883504 FOXA1 JASPAR yes 118433362
chr1 201883504 201884219 ZNF274 GTRD no Bone Marrow (K562) 107857198
Genes associated with rs139947195[chr1:201883504], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More