EnhancerDB
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  3. rs139975907[chr6:47409354]
Enhancers that have rs139975907[chr6:47409354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47400465 47410735 enh9148
Large Intestine Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Pancreas Stomach
Transcript factors that have rs139975907[chr6:47409354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47409344 47409354 HOXD13 JASPAR yes 102031420
chr6 47409344 47409355 HOXA10 JASPAR yes 102031421
chr6 47409345 47409355 ALX3 JASPAR yes 102031422
chr6 47409345 47409355 GSX1 JASPAR yes 102031423
chr6 47409345 47409355 GSX2 JASPAR yes 102031424
chr6 47409345 47409355 HOXB2 JASPAR yes 102031425
chr6 47409345 47409355 HOXB3 JASPAR yes 102031426
chr6 47409345 47409355 MEOX2 JASPAR yes 102031427
chr6 47409345 47409355 MIXL1 JASPAR yes 102031428
chr6 47409345 47409355 MNX1 JASPAR yes 102031429
chr6 47409346 47409354 LMX1A JASPAR yes 102031430
chr6 47409346 47409354 LMX1B JASPAR yes 102031431
chr6 47409346 47409354 NKX6-1 JASPAR yes 102031432
chr6 47409346 47409354 NKX6-2 JASPAR yes 102031433
chr6 47409346 47409354 PDX1 JASPAR yes 102031434
chr6 47409346 47409354 VAX1 JASPAR yes 102031435
chr6 47409346 47409354 VAX2 JASPAR yes 102031436
chr6 47409346 47409354 VSX1 JASPAR yes 102031437
chr6 47409350 47409362 PKNOX2 JASPAR yes 102031438
chr6 47409351 47409361 FIGLA JASPAR yes 102031439
chr6 47409351 47409361 ID4 JASPAR yes 102031440
chr6 47409351 47409361 TCF3 JASPAR yes 102031441
chr6 47409351 47409361 TCF4 JASPAR yes 102031442
chr6 47409353 47409358 USF2 TRANSFAC yes 102031443
Genes associated with rs139975907[chr6:47409354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More