EnhancerDB
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  3. rs139988394[chr17:64948558]
Enhancers that have rs139988394[chr17:64948558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 64948296 64948612 vista25618
VISTA
Transcript factors that have rs139988394[chr17:64948558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64947995 64948591 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21781984
chr17 64947995 64948591 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108285152
chr17 64947995 64948591 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108285153
chr17 64947995 64948646 TCF7L2 UCSC Txn Factor no Conserved 108285154
chr17 64947995 64948646 TCF7L2 UCSC Txn Factor no Conserved 108285155
chr17 64948031 64948571 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285156
chr17 64948035 64948611 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285157
chr17 64948056 64948876 POLR2A UCSC Txn Factor no Conserved 108285159
chr17 64948081 64948565 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285166
chr17 64948090 64948620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21781989
chr17 64948090 64948620 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285167
chr17 64948109 64948759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21781990
chr17 64948109 64948759 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285169
chr17 64948122 64948658 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285171
chr17 64948138 64948654 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21781995
chr17 64948138 64948654 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285177
chr17 64948142 64948646 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21781998
chr17 64948142 64948646 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285184
chr17 64948150 64948662 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782003
chr17 64948150 64948662 E2F1 UCSC Txn Factor no Conserved 108285189
chr17 64948150 64948662 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285190
chr17 64948204 64948580 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782013
chr17 64948204 64948580 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108285203
chr17 64948209 64948639 MYC UCSC Txn Factor no Conserved 108285205
chr17 64948217 64948687 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782015
chr17 64948217 64948687 GATA3 UCSC Txn Factor no Conserved 108285206
chr17 64948217 64948687 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285207
chr17 64948303 64948602 ESR1 UCSC Txn Factor no Conserved 108285212
chr17 64948359 64948599 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782017
chr17 64948359 64948599 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285213
chr17 64948359 64948599 ZNF217 UCSC Txn Factor no Conserved 108285214
chr17 64948380 64948558 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782020
chr17 64948380 64948558 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285217
chr17 64948492 64948876 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21782021
chr17 64948492 64948876 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108285218
Genes associated with rs139988394[chr17:64948558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More