EnhancerDB
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  3. rs140015552[chr12:109000050]
Enhancers that have rs140015552[chr12:109000050]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs140015552[chr12:109000050]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108999706 109000126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570958
chr12 109000030 109000050 RREB1 JASPAR yes 123605663
chr12 109000031 109000051 RREB1 JASPAR yes 123605664
chr12 109000033 109000053 RREB1 JASPAR yes 123605665
chr12 109000034 109000054 RREB1 JASPAR yes 123605666
chr12 109000035 109000055 RREB1 JASPAR yes 123605667
chr12 109000042 109000062 RREB1 JASPAR yes 123605668
chr12 109000045 109000065 RREB1 JASPAR yes 123605669
chr12 109000046 109000051 SP1 TRANSFAC yes 123605670
chr12 109000046 109000066 RREB1 JASPAR yes 123605671
chr12 109000047 109000067 RREB1 JASPAR yes 123605672
Genes associated with rs140015552[chr12:109000050], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More