EnhancerDB
  1. Home
  2. SNP
  3. rs140090970[chr1:200258331]
Enhancers that have rs140090970[chr1:200258331]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs140090970[chr1:200258331]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200258074 200259012 ZNF143 GTRD no Epithelial (MCF-7) 21362759
chr1 200258150 200259011 ZNF143 GTRD no Epithelial (MCF-7) 21362760
chr1 200258173 200259083 ZNF143 GTRD no Epithelial (MCF-7) 21362761
chr1 200258183 200259003 ZNF143 GTRD no Epithelial (MCF-7) 21362762
chr1 200258194 200258926 ZNF143 GTRD no Epithelial (MCF-7) 21362763
chr1 200258197 200259776 ZNF143 GTRD no Epithelial (MCF-7) 21362764
chr1 200258211 200259218 ZNF143 GTRD no Epithelial (MCF-7) 21362765
chr1 200258220 200258797 ZNF143 GTRD no Epithelial (MCF-7) 21362766
chr1 200258221 200259023 ZNF274 GTRD no Liver (HepG2) 21362767
chr1 200258297 200259018 ZNF274 GTRD no Blood (GM12878) 21362768
chr1 200258300 200258856 ZNF143 GTRD no Epithelial (MCF-7) 21362769
chr1 200258303 200259012 ZNF274 GTRD no Blood (GM12878) 21362770
chr1 200258308 200258945 ZNF143 GTRD no Epithelial (MCF-7) 21362771
chr1 200258320 200258339 PAX5 JASPAR yes 34429684
chr1 200258321 200258835 ZNF274 GTRD no Liver (HepG2) 21362772
Genes associated with rs140090970[chr1:200258331], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More