EnhancerDB
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  3. rs140253009[chr12:122955400]
Enhancers that have rs140253009[chr12:122955400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs140253009[chr12:122955400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122955051 122955709 MYOD GTRD no Muscle (Myoblast) 21580129
chr12 122955124 122955593 ZNF143 GTRD no Epithelial (MCF-7) 21580130
chr12 122955391 122955402 USF1 JASPAR yes 124283811
chr12 122955391 122955402 USF2 JASPAR yes 124283812
chr12 122955392 122955402 SREBF2 JASPAR yes 124283813
Genes associated with rs140253009[chr12:122955400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More