EnhancerDB
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  3. rs140309144[chr1:172715471]
Enhancers that have rs140309144[chr1:172715471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs140309144[chr1:172715471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172715305 172715935 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845969
chr1 172715332 172715922 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845970
chr1 172715336 172715932 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107845971
chr1 172715347 172715943 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845972
chr1 172715382 172715932 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845973
chr1 172715384 172715960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350224
chr1 172715384 172715960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845974
chr1 172715389 172715905 CEBPB UCSC Txn Factor no Conserved 107845975
chr1 172715389 172715905 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845976
chr1 172715391 172715931 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350225
chr1 172715391 172715931 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845977
chr1 172715392 172715796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845978
chr1 172715407 172715777 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845979
chr1 172715412 172715816 RUNX3 UCSC Txn Factor no Conserved 107845980
chr1 172715412 172715816 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845981
chr1 172715415 172715804 NFIC UCSC Txn Factor no Conserved 107845982
chr1 172715415 172715804 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845983
chr1 172715419 172715775 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845984
chr1 172715420 172715796 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350226
chr1 172715420 172715796 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845985
chr1 172715425 172715821 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845986
chr1 172715430 172715734 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845987
chr1 172715433 172715843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845988
chr1 172715436 172715976 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350227
chr1 172715436 172715976 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845989
chr1 172715442 172715752 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107845990
chr1 172715444 172715800 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845991
chr1 172715446 172715776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845992
chr1 172715447 172715831 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845993
chr1 172715449 172715805 IRF1 UCSC Txn Factor no Conserved 107845994
chr1 172715451 172715771 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845995
chr1 172715458 172715473 SOX21 JASPAR yes 33150936
chr1 172715458 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21350228
chr1 172715458 172715728 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845996
chr1 172715459 172715779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845997
chr1 172715465 172715655 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845998
chr1 172715466 172715730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845999
chr1 172715468 172715758 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846000
chr1 172715469 172715749 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846001
chr1 172715470 172715485 LEF1 JASPAR yes 33150938
chr1 172715470 172715485 LEF1 JASPAR yes 118399558
chr1 172715471 172715781 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846002
Genes associated with rs140309144[chr1:172715471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More