EnhancerDB
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  3. rs140315680[chr1:172718254]
Enhancers that have rs140315680[chr1:172718254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs140315680[chr1:172718254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172717502 172718293 ZBTB33 GTRD no Lung (A549) 21350242
chr1 172717512 172718364 ZBTB33 GTRD no Lung (A549) 21350243
chr1 172717562 172718257 ZBTB33 GTRD no Lung (A549) 21350246
chr1 172717562 172718272 ZBTB33 GTRD no Lung (A549) 21350247
chr1 172717598 172718263 ZBTB33 GTRD no Lung (A549) 21350250
chr1 172718240 172718254 PLAG1 JASPAR yes 33151339
chr1 172718241 172718258 ESR1 JASPAR yes 33151340
chr1 172718242 172718257 ESR2 JASPAR yes 33151341
chr1 172718250 172718255 SP1 TRANSFAC yes 33151343
Genes associated with rs140315680[chr1:172718254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More