EnhancerDB
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  3. rs140384300[chr1:42178186]
Enhancers that have rs140384300[chr1:42178186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42174680 42197130 enh289
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myotube) Thymus Heart
Transcript factors that have rs140384300[chr1:42178186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42178177 42178186 HIC2 JASPAR yes 28412499
chr1 42178180 42178195 SCRT1 JASPAR yes 28412501
chr1 42178181 42178191 ID4 JASPAR yes 28412502
chr1 42178181 42178191 TCF3 JASPAR yes 28412503
chr1 42178181 42178191 TCF4 JASPAR yes 28412504
chr1 42178182 42178191 SNAI2 JASPAR yes 28412505
chr1 42178182 42178195 SCRT2 JASPAR yes 28412506
chr1 42178183 42178188 USF2 TRANSFAC yes 28412507
Genes associated with rs140384300[chr1:42178186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More