EnhancerDB
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Enhancers that have rs140772953[chr15:42262559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42246345 42263215 enh3550
Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Heart
chr15 42262075 42262564 vista19774
VISTA
Transcript factors that have rs140772953[chr15:42262559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42261567 42265256 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651384
chr15 42261567 42265256 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135385
chr15 42261567 42265383 POLR2A UCSC Txn Factor no Conserved 108135386
chr15 42262029 42262713 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651386
chr15 42262029 42262713 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135391
chr15 42262131 42262721 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651387
chr15 42262131 42262721 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135392
chr15 42262191 42262575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651389
chr15 42262191 42262575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135394
chr15 42262191 42262627 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651390
chr15 42262191 42262627 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135395
chr15 42262205 42262725 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651392
chr15 42262205 42262725 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135397
chr15 42262258 42262578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651393
chr15 42262258 42262578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135398
chr15 42262261 42262671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651394
chr15 42262261 42262671 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135399
chr15 42262268 42262578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651395
chr15 42262268 42262578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135400
chr15 42262277 42262567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651398
chr15 42262277 42262567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135404
chr15 42262279 42262590 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651399
chr15 42262279 42262590 RUNX3 UCSC Txn Factor no Conserved 108135405
chr15 42262279 42262590 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135406
chr15 42262283 42262623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651401
chr15 42262283 42262623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135408
chr15 42262456 42262608 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21651404
chr15 42262456 42262608 SRF UCSC Txn Factor no Conserved 108135411
chr15 42262456 42262608 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108135412
chr15 42262551 42262568 RARA JASPAR yes 23011657
chr15 42262551 42262568 RARA JASPAR yes 70514466
Genes associated with rs140772953[chr15:42262559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More