EnhancerDB
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  3. rs1408947[chr1:42364198]
Enhancers that have rs1408947[chr1:42364198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs1408947[chr1:42364198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42364192 42364207 TFAP2A JASPAR yes 28435403
chr1 42364192 42364207 TFAP2C JASPAR yes 28435404
chr1 42364195 42364207 TFAP2B JASPAR yes 28435405
chr1 42364195 42364207 TFAP2C JASPAR yes 28435406
Genes associated with rs1408947[chr1:42364198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More