EnhancerDB
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  3. rs141000856[chr1:117050819]
Enhancers that have rs141000856[chr1:117050819]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 117050808 117051139 vista3061
VISTA
Transcript factors that have rs141000856[chr1:117050819]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117050689 117051009 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21333325
chr1 117050689 117051009 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824463
chr1 117050772 117051012 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21333326
chr1 117050772 117051012 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107824464
chr1 117050783 117052298 ZNF274 GTRD no Blood (GM12878) 21333327
chr1 117050783 117052298 ZNF274 GTRD no Blood (GM12878) 107824465
chr1 117050783 117052298 ZNF274 GTRD no Blood (GM12878) 107824466
Genes associated with rs141000856[chr1:117050819], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More