EnhancerDB
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  3. rs141078628[chr1:42085261]
Enhancers that have rs141078628[chr1:42085261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs141078628[chr1:42085261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42085242 42085262 PPARG JASPAR yes 28402053
chr1 42085243 42085263 PPARG JASPAR yes 28402054
chr1 42085244 42085261 ESR1 JASPAR yes 28402055
chr1 42085244 42085262 ESR2 JASPAR yes 28402056
chr1 42085245 42085265 ESR1 JASPAR yes 28402058
chr1 42085253 42085267 RORA JASPAR yes 28402059
Genes associated with rs141078628[chr1:42085261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More