EnhancerDB
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Enhancers that have rs141152154[chr12:109010561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs141152154[chr12:109010561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109010248 109010797 ZNF274 GTRD no Liver (HepG2) 108056875
chr12 109010364 109010795 ZNF274 GTRD no Liver (HepG2) 108056876
chr12 109010480 109011426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570998
chr12 109010480 109011426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056877
chr12 109010480 109011426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056878
chr12 109010554 109010570 POU4F2 JASPAR yes 123607248
chr12 109010554 109010570 POU4F3 JASPAR yes 123607249
chr12 109010559 109010563 YY1 TRANSFAC yes 123607250
chr12 109010561 109010579 NR3C1 JASPAR yes 123607251
Genes associated with rs141152154[chr12:109010561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More