EnhancerDB
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  3. rs141390179[chr1:42153743]
Enhancers that have rs141390179[chr1:42153743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141390179[chr1:42153743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42153730 42153745 TFAP2A JASPAR yes 28410371
chr1 42153733 42153745 TFAP2A JASPAR yes 28410372
chr1 42153733 42153745 TFAP2B JASPAR yes 28410373
chr1 42153733 42153745 TFAP2C JASPAR yes 28410374
chr1 42153737 42153746 HIC2 JASPAR yes 28410375
chr1 42153740 42153744 LFA1 TRANSFAC yes 28410376
Genes associated with rs141390179[chr1:42153743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More