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- rs141525795[chr16:2720609]
Enhancers that have rs141525795[chr16:2720609]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2718145 |
2727390 |
enh3846 |
|
|
Transcript factors that have rs141525795[chr16:2720609]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2718641
|
2722098
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684956
|
|
|
chr16
|
2718692
|
2721852
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684957
|
|
|
chr16
|
2719131
|
2722158
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684958
|
|
|
chr16
|
2719511
|
2721958
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684961
|
|
|
chr16
|
2719724
|
2721949
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684962
|
|
|
chr16
|
2719744
|
2721984
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684963
|
|
|
chr16
|
2719801
|
2722003
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684964
|
|
|
chr16
|
2720375
|
2721662
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684966
|
|
|
chr16
|
2720450
|
2722063
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684967
|
|
|
chr16
|
2720469
|
2721762
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684968
|
|
|
chr16
|
2720590
|
2720609
|
RFX2
|
JASPAR
|
yes
|
|
9186619
|
|
Genes associated with rs141525795[chr16:2720609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
2227184
|
2246526
|
-
|
CASKIN1
|
ENSG00000167971.14
|
2246526
|
474083
|
Spleen
|
0.325946
|
14427
|
|