EnhancerDB
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  3. rs141571610[chr1:25352876]
Enhancers that have rs141571610[chr1:25352876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
Transcript factors that have rs141571610[chr1:25352876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25352055 25352995 TEF1 GTRD no Bone (Osteoblast) 107802486
chr1 25352861 25352879 ESR1 JASPAR yes 27555182
chr1 25352865 25352878 EOMES JASPAR yes 27555183
chr1 25352867 25352877 TBR1 JASPAR yes 27555184
chr1 25352867 25352878 TBX20 JASPAR yes 27555185
chr1 25352867 25352878 TBX2 JASPAR yes 27555186
chr1 25352868 25352878 TBX21 JASPAR yes 27555187
chr1 25352869 25352877 MGA JASPAR yes 27555188
chr1 25352869 25352877 TBX15 JASPAR yes 27555189
chr1 25352869 25352877 TBX1 JASPAR yes 27555190
chr1 25352869 25352877 TBX4 JASPAR yes 27555191
chr1 25352869 25352877 TBX5 JASPAR yes 27555192
chr1 25352869 25352878 ZEB1 JASPAR yes 27555193
chr1 25352870 25352880 FIGLA JASPAR yes 27555194
chr1 25352870 25352880 ID4 JASPAR yes 27555195
chr1 25352870 25352880 TCF3 JASPAR yes 27555196
chr1 25352870 25352880 TCF4 JASPAR yes 27555197
chr1 25352871 25352880 SNAI2 JASPAR yes 27555198
chr1 25352872 25352877 USF2 TRANSFAC yes 27555199
chr1 25352875 25352888 SMAD2 JASPAR yes 27555200
Genes associated with rs141571610[chr1:25352876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More