EnhancerDB
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  3. rs141571617[chr1:117026949]
Enhancers that have rs141571617[chr1:117026949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs141571617[chr1:117026949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117025987 117027147 AR GTRD no Prostate (PC-3) 21332945
chr1 117026929 117026950 ZNF263 JASPAR yes 31812109
chr1 117026930 117026951 ZNF263 JASPAR yes 31812110
chr1 117026933 117026954 ZNF263 JASPAR yes 31812112
chr1 117026938 117026949 E2F6 JASPAR yes 31812114
chr1 117026940 117026958 RARA JASPAR yes 31812116
chr1 117026940 117026961 ZNF263 JASPAR yes 31812117
chr1 117026942 117026953 E2F6 JASPAR yes 31812119
chr1 117026948 117026966 RARA JASPAR yes 31812120
Genes associated with rs141571617[chr1:117026949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More