EnhancerDB
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  3. rs141612228[chr1:17223821]
Enhancers that have rs141612228[chr1:17223821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs141612228[chr1:17223821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17223807 17223825 RARA JASPAR yes 27062816
chr1 17223817 17223837 ESR1 JASPAR yes 27062818
chr1 17223821 17223833 GLI2 JASPAR yes 27062819
Genes associated with rs141612228[chr1:17223821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More